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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954832.1_cds_XP_016493552.1_83650
CDS Infomation

[gene=LOC107812889] [db_xref=GeneID:107812889] [protein=proline-rich receptor-like protein kinase PERK9] [protein_id=XP_016493552.1] [location=complement(join(101077..101277,101368..101529,103455..103602,103704..103780,103862..103932,104845..104931,105015..105425,105543..106656))] [gbkey=CDS]
Sequence

ATGTCAATTGTTTCACCTCCTCCAACTCCAAGTTCTACATCATTTGCAGCTCCACCAACT
GCCTTTAGTTCATCATCTCAGCTTTCTTCTCCAGCACCTACATTTCAGCCCAATAATAAC
TCATCATCTATTGCATCTCCTCCCCCTAGCAGTTTACCCCCACAATCTGCTCCTCCAATA
AATGCAACATCTCCACCTATAGCACCAGCACCACTGCCTCAATCACCTCCTCCAACAAAT
ATAACATTGCCTCCTCCTGCCTCATCTCCACCTCCACTCACTTCACCAACACCTCCTGTA
GAATCTGCTCCTCCAATTAGTCCTCCACCTCTTCCTTCGTCGCCTCCATCTACACCTTCC
GGTCCACCTCCAACTTCTAGTCCGCCGCCTAGTTCATCTCCACCTCCATCATCCAGCAAA
CCAAGTAGTCCACCACTACCTCAACCCGAACCAACTAGTCCTGCAAGTTCACCTCCATCA
TCATCGGCGCGTCCCCCTGCATTGTCACCTCCTCATTCATCAAGACTTCCCCCTGCATTG
TCACCTCCAGCACCTGTGCAAAATCCAAAAACTCCTCCAGCACCACGATCACCGGGAAAT
CCATCTCCTGAACCTCCAAAAAGCTCATCACATTCACCACCTTCATCCAAGACGCCTGCC
AAATCACCTCCATCTAAACCACCACAAAGTAGTCCAGATTCCCCAGCCTTAGTCCCTCCA
AAAAATTCATCCCCTTCACCAGCTTCTTTACCTCCTAGTAACTCAGCATCCTCTAGTTCC
CCACCTACAGACTCATCATTACCTACACCTATAGCACAATTATCACCACCTCAAACATCC
AATGGTGCACAACCTTCTTTTACCCCTCCTTCACCATCATTTCCTTCAGGTGACGCTACT
GCGTCCAGAAACAATTCGACAGATAGATCAAATGCTACAGGAGATGGAGGAATTGGCACT
GGAGGATCAGTTGCTATTGGTATCATACTTGTGCTTCTGTTGCTTGGTATTATTGGAGCT
GCGGGATGGTGCATTTGGAAGCGAAAGAAAAAGGATTCAGGCCTGAATGGTGGTTATATA
TTGCCAACAACTCTCGTCTCCTCTCCAAAATCAGGTTCTGCCTCGTTAAAGGTTCGAGAA
TCGACACCTGTGATTGGAAATGGAGCTGGCTCTAATATTGTCAACTCTCCAGGAAATGGT
GGTGGAGTAGGCCATTCAAAACCATGGTTTACTTATCAAGAACTACTTGAGGCTACAAAT
GAATTTTCTGAGCAGAATCTGTTGGGTGAGGGTGGATTTGGTTCTGTGTACAAGGGATGC
CTAGTAGATGGGAGAGATGTAGCAGTAAAGAAGCTTAATATTGGTGGGAGCCAGGGGGAG
CGTGAGTTCAGAGCTGAAGTTGAAATCATTAGTCGGATACATCATCGACACTTGGTTTCA
CTTGTAGGTTATTGCATTTATGAGAGTGGAAGGCTCCTTGTTTATGACTATGTCCCCAAC
GACACCCTATACTTCCATCTTCATGGGCAAGGAAGACCTGTTATGGATTGGCCAGCACGT
GTTAAGATTGCTGTTGGTGCAGCCCGTGGAATAGCTTATCTGCATGAAGATTGCTGTCCT
CGTATCATCCACAGAGATATCAAGTCGTCTAACATTCTTTTGGATATTAATTTTGAGGCT
CGGGTTTCTGATTTTGGATTAGCTAAATTAGCTCAGGATGCAAAAAGTCACGTTACAACG
CGTGTTATGGGTACATTTGGATACATGGCGCCTGAATATGCATCCAGTGGAAAGCTGACT
GAAAAATCCGATGTATATTCATTTGGAGTTGTACTTCTGGAGCTAATTACTGGACGGAAG
CCTGTGGATACATCTCAGCCTTCGGGGGAGGAAAGTCTAGTTGAGTGGGCTCGACCTTTG
CTTAGTAATGCGCTTGAGAAAGAGGAATTTGATCAGTTGGCAGATCCTCGCCTTGAGAAG
AACTATGTTGACAATGAGATGTTTCGGATGATTGAGGCCGCTGCAGCTTGTGTGCGTCAC
TCAGCTGCAAAGAGACCAGGGATGGGACAGATCATGAGAGCTTTTGATAGTATGCTTATG
TCTGATCTGACAAATGGGATGAAGGTTGGTGAAAGTGCAATATATAACTCTGCAGAGCAA
TCTGCGCAAATAAGATTGTTTCGGAGGATGGCATTTGCTAGTCAAGATTTTAATTCAGAT
TTTTCCAGTCAAGGCAACCATTACAGTAAAGAGTTAGCTGATCATTATTAG

Peptide Sequence

PEP ID

XP_016493552.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK9 [Nicotiana tabacum]
Sequence

MSIVSPPPTPSSTSFAAPPTAFSSSSQLSSPAPTFQPNNNSSSIASPPPSSLPPQSAPPI
NATSPPIAPAPLPQSPPPTNITLPPPASSPPPLTSPTPPVESAPPISPPPLPSSPPSTPS
GPPPTSSPPPSSSPPPSSSKPSSPPLPQPEPTSPASSPPSSSARPPALSPPHSSRLPPAL
SPPAPVQNPKTPPAPRSPGNPSPEPPKSSSHSPPSSKTPAKSPPSKPPQSSPDSPALVPP
KNSSPSPASLPPSNSASSSSPPTDSSLPTPIAQLSPPQTSNGAQPSFTPPSPSFPSGDAT
ASRNNSTDRSNATGDGGIGTGGSVAIGIILVLLLLGIIGAAGWCIWKRKKKDSGLNGGYI
LPTTLVSSPKSGSASLKVRESTPVIGNGAGSNIVNSPGNGGGVGHSKPWFTYQELLEATN
EFSEQNLLGEGGFGSVYKGCLVDGRDVAVKKLNIGGSQGEREFRAEVEIISRIHHRHLVS
LVGYCIYESGRLLVYDYVPNDTLYFHLHGQGRPVMDWPARVKIAVGAARGIAYLHEDCCP
RIIHRDIKSSNILLDINFEARVSDFGLAKLAQDAKSHVTTRVMGTFGYMAPEYASSGKLT
EKSDVYSFGVVLLELITGRKPVDTSQPSGEESLVEWARPLLSNALEKEEFDQLADPRLEK
NYVDNEMFRMIEAAAACVRHSAAKRPGMGQIMRAFDSMLMSDLTNGMKVGESAIYNSAEQ
SAQIRLFRRMAFASQDFNSDFSSQGNHYSKELADHY

Transcript Sequence

Gene sequence data has not been registered.